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BaseInfo

ncRNA ID	novel_gar_miR1461
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr7:78481282-78481466 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180719
Length	24
Mature sequence(if miRNA)	1 - GUAGGACUGUCGUUAGGGAGGUAA - 24
Stem-loop(if miRNA)	--              C       A   A                     CA             UAU  A  AAUCCAA     AUUUAUUUA   ACCUCCCUAACGGC GUCCUAC UGG AGUCCAAAUAGGUUUUAAAUA  AAUUUGGAUGUCU   AU GC       AUUAA         A   |||||||||||||| ||||||| ||| |||||||||||||||||||||  |||||||||||||   || ||       |||||         U   UGGAGGGAUUGCUG CAGGAUG AUC UUAGGUUUAUCUAAAAUUUAU  UUGAAUCUACAGA   UA CG       AUUUU         U AA              U       C   G                     AG             --U  A  --ACUCU     UAUGUAAAA
Stem-loop sequence	ACCUCCCUAACGGCCGUCCUACAUGGAAGUCCAAAUAGGUUUUAAAUACAAAUUUGGAUGUCUUAUAUAGCAAUCCAAAUUAAAUUUAUUUAAUUAAAAUGUAUUUUUAUCUCAGCAAUUAGACAUCUAAGUUGAUAUUUAAAAUCUAUUUGGAUUGCUACGUAGGACUGUCGUUAGGGAGGUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017771727.1	ncRNA:24   AAUGGAGGGAUUGCUGUCAGGAUG   1   **||=||=|||||||||||*|||| targets:485   CCACUUCUCUAACGACAGUACUAC   508 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum GATA transcription factor 5-like (LOC108470425), mRNA	GATA transcription factor 5-like(LOC108470425)	coding protein	psRNATarget