ncRNA ID | novel_gar_miR1453 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:34437122-34437193 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180719 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGACAUGGCAAAAAUGCUCCC - 21 |
Stem-loop(if miRNA) |
--              CA      A   --G     A   GAGCGUUUUUGCCA  UCAGUA AGA   UGUCC C   ||||||||||||||  |||||| |||   |||||   CUCGUAAAAACGGU  AGUCGU UUU   GCGGG G CC              AC      G   AGU     A |
Stem-loop sequence | GAGCGUUUUUGCCACAUCAGUAAAGAGUGUCCACGAGGGCGUGAUUUGUGCUGACAUGGCAAAAAUGCUCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017776740.1 |
|
2.5 | PREDICTED: Gossypium arboreum bifunctional phosphatase IMPL2, chloroplastic (LOC108474730), mRNA | bifunctional phosphatase IMPL2, chloroplastic(LOC108474730) | coding protein | psRNATarget |