Search result

BaseInfo

ncRNA ID ath-miRf11086-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AGUGUUUGAACCUAACGAGC - NA
Stem-loop(if miRNA)                 UG                       -    ACC  UCUGAGACCGUGUUAGAUU
CGACGAACCUAGUGUU  AACCUAACGAGCAGUACUUUGUU CCUA   CU                   A
||||||||||||||||  ||||||||||||||||||||||| ||||   ||                   G
GCUGCUUGGAUCACAA  UUGGAUUGCUCGUCAUGGAACAA GGAU   CA                   U
                GU                       U    ---  CAAUCUGACAGUGAACAGA
Stem-loop sequence CGACGAACCUAGUGUUUGAACCUAACGAGCAGUACUUUGUUCCUAACCCUUCUGAGACCGUGUUAGAUUAGUAGACAAGUGACAGUCUAACACUAGGUAACAAGGUACUGCUCGUUAGGUUUGAACACUAGGUUCGUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001342491.1
ncRNA:20   CGAGCAAUCCAAGUUUGUGA   1
  ||||||*||||||||=||||
targets:1812   GCUCGUCAGGUUCAAGCACU   1831

2.5 Arabidopsis thaliana Plant regulator RWP-RK family protein mRNA Plant regulator RWP-RK family protein(AT4G38340) coding protein psRNATarget
NM_119996.2
ncRNA:20   CGAGCAAUCCAAGUUUGUGA   1
  ||||||*||||||||=||||
targets:1832   GCUCGUCAGGUUCAAGCACU   1851

2.5 Arabidopsis thaliana Plant regulator RWP-RK family protein partial mRNA Plant regulator RWP-RK family protein(AT4G38340) coding protein psRNATarget