ncRNA ID | novel_gar_miR1452 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:92227436-92227524 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUGAUAGUGUAACUAGUUGCUGA - 24 |
Stem-loop(if miRNA) |
--   C      C   U  -    AUG    AAAAUAAUUCAAAA   GGC ACUGGU UAU CU UUAC   CCAU              C   ||| |||||| ||| || ||||   ||||              A   UCG UGAUCA AUG GA AGUG   GGUG              U AG   U      -   U  U    AUA    ACGAACAAUGACAA |
Stem-loop sequence | GGCCACUGGUCUAUUCUUUACAUGCCAUAAAAUAAUUCAAAACAUAACAGUAACAAGCAGUGGAUAGUGAUAGUGUAACUAGUUGCUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017748633.1 |
|
3.0 | PREDICTED: Gossypium arboreum amino acid permease 6-like (LOC108450867), mRNA | amino acid permease 6-like(LOC108450867) | coding protein | psRNATarget |