ncRNA ID | novel_gar_miR1447 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr5:18246265-18246428 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180719;SRR3180721 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UGCUGUCUAGUAGUUGUCGACC - 22 |
Stem-loop(if miRNA) |
UU  A UG  UUU --     AAGGGAGAUACGGCAUGUGCAUCAAAUAAACUCUGGUAUAACUCUUUGUACGUCAUUGGAAUGG   GC U  GC   A  GAUAG                                                                G   || |  ||   |  |||||                                                                C   CC A  CU   G  GAUGA                                                                G --  - -G  --- UU     UCUGUCGUCCCGGGUGGGUCUGGUUUCGGGUUGUGUUUUGUUUUAUCCCUCUUUGAAGUUAAAU |
Stem-loop sequence | UUGCAUUGGCUUUAGAUAGAAGGGAGAUACGGCAUGUGCAUCAAAUAAACUCUGGUAUAACUCUUUGUACGUCAUUGGAAUGGGCGUAAAUUGAAGUUUCUCCCUAUUUUGUUUUGUGUUGGGCUUUGGUCUGGGUGGGCCCUGCUGUCUAGUAGUUGUCGACC |