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BaseInfo

ncRNA ID novel_gar_miR1446
Species Gossypium arboreum
Class miRNA
Genome position Chr4:94597755-94597810 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 33 - ACGUGACACGCUGGAUUCGGCCGU - 56
Stem-loop(if miRNA) --AC       GC           GUAA
    GUGACAC  UGGAUUCGGCC    U
    |||||||  |||||||||||
    CAUUGUG  AUUUGAGCCGG    G
AUAA       GU           GUCU
Stem-loop sequence ACGUGACACGCUGGAUUCGGCCGUAAUGUCUGGGCCGAGUUUAUGGUGUUACAAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017762242.1
ncRNA:24   UGCCGGCUUAGGUCGCACAGUGCA   1
  ||--||||||||||||||||||*|
targets:1809   AC--CCGAAUCCAGCGUGUCACAU   1830

1.5 PREDICTED: Gossypium arboreum metallophosphoesterase 1-like (LOC108462268), transcript variant X1, mRNA metallophosphoesterase 1-like(LOC108462268) coding protein psRNATarget