| ncRNA ID | novel_gar_miR1436 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:16242632-16242865 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180719 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AGGAUUAUAUGAAACAGUGACGCC - 24 |
| Stem-loop(if miRNA) |
-- UA U U A C AAAAA - CAA AGGAU UA GAAACAGUGACGCCACGUCAUCUGU UUCCUUUCUAAUAGUUUUAU UCACAUCAGUAUUUUUAUCCUGAAUUUCAGGAUUUUAUC UGAA UCAA AUU A ||||| || ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||| ||| UCCUA AU UUUUGUCACUGCGGUGCAGUAGAUA AAGGAAAGAUUAUCAAAGUA AGUGUAGUCAUAAAAAUAGGACUUAAAGUUCUAAAAUAG ACUU AGUU UAA U UU CC C U C A ---AA C AAU |
| Stem-loop sequence | AGGAUUAUAUGAAACAGUGACGCCACGUCAUCUGUUUUCCUUUCUAAUAGUUUUAUAUCACAUCAGUAUUUUUAUCCUGAAUUUCAGGAUUUUAUCCUGAAAAAAAUCAAAUUCAAAUUAAAAUCUUGAAAUUCAAGAUAAAAUCUUGAAAUUCAGGAUAAAAAUACUGAUGUGACAUGAAACUAUUAGAAAGGAAUAUAGAUGACGUGGCGUCACUGUUUUCUACCAUCCUUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017758885.1 |
|
1.5 | PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA | enolase-like(LOC108459500) | coding protein | psRNATarget | |||||||||
| XM_017758885.1 |
|
1.5 | PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA | enolase-like(LOC108459500) | coding protein | psRNATarget | |||||||||
| XM_017764021.1 |
|
2.5 | PREDICTED: Gossypium arboreum bifunctional L-3-cyanoalanine synthase/cysteine synthase D1-like (LOC108463981), transcript variant X1, mRNA | bifunctional L-3-cyanoalanine synthase/cysteine synthase D1-like(LOC108463981) | coding protein | psRNATarget |