ncRNA ID | novel_gar_miR1435 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:39382562-39382643 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180719;SRR3180721 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUACCAAAAUAUCUAAGGAU - 21 |
Stem-loop(if miRNA) |
--     C                             AAUA   UUUAC AAAAUAUCUAAGGAUUUACCAAUAUUUCU    U   ||||| |||||||||||||||||||||||||||||   GAAUG UUUUAUAGAUUCCUAAAUGGUUAUAAAGA    U GA     A                             AUCU |
Stem-loop sequence | UUUACCAAAAUAUCUAAGGAUUUACCAAUAUUUCUAAUAUUUCUAAGAAAUAUUGGUAAAUCCUUAGAUAUUUUAGUAAGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017791195.1 |
|
3.0 | PREDICTED: Gossypium arboreum serine/threonine-protein kinase tricorner-like (LOC108487002), transcript variant X2, mRNA | serine/threonine-protein kinase tricorner-like(LOC108487002) | coding protein | psRNATarget |