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BaseInfo

ncRNA ID novel_gar_miR1428
Species Gossypium arboreum
Class miRNA
Genome position Chr3:68315546-68315596 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180719;SRR3180720
Length 21
Mature sequence(if miRNA) 31 - UCAUGAUCUUUAGUGGCGUUU - 51
Stem-loop(if miRNA) --           A          U
  UCAUGAUCUUU GUGGCGUUUU U
  ||||||||||| |||||||||| G
  AGUACUGGAAA UACCGCGAAA U
UC           G          A
Stem-loop sequence UCAUGAUCUUUAGUGGCGUUUUUUGUAAAAGCGCCAUGAAAGGUCAUGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017768165.1
ncRNA:21   UUUGCGGUGAUUUCUAGUACU   1
  ||=||||=||||||||||||*
targets:1500   AAGCGCCGCUAAAGAUCAUGU   1520

3.0 PREDICTED: Gossypium arboreum diphthamide biosynthesis protein 2-like (LOC108467522), mRNA diphthamide biosynthesis protein 2-like(LOC108467522) coding protein psRNATarget