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BaseInfo

ncRNA ID	novel_gar_miR1426
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr3:97822989-97823067 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180719
Length	21
Mature sequence(if miRNA)	1 - CGAUAUUGGAAGGUUGGAAGU - 21
Stem-loop(if miRNA)	--G  G       G  --    A  UAAAGGCAAGCUUGAA    UC UAACCUU CA  AUCG GU                U    || ||||||| ||  |||| ||    AG GUUGGAA GU  UAGC CG                A UGA  -       G  UA    A  AAAUAAAGGAGUUAGA
Stem-loop sequence	GUCGUAACCUUGCAAUCGAGUUAAAGGCAAGCUUGAAUAAGAUUGAGGAAAUAAAGCACGAUAUUGGAAGGUUGGAAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017788200.1	ncRNA:21   UGAAGGUUGGAAGGUUAUAGC   1   |||||||||||*||||||||* targets:7   ACUUCCAACCUGCCAAUAUCU   27 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum probable serine/threonine-protein kinase WNK4 (LOC108484424), mRNA	probable serine/threonine-protein kinase WNK4(LOC108484424)	coding protein	psRNATarget
XM_017750185.1	ncRNA:21   UGAAGGUUGGAAGGUUAUAGC   1   |**||||||*||||||||||| targets:862   AAAUCCAACAUUCCAAUAUCG   882 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum polygalacturonase At1g48100 (LOC108452405), mRNA	polygalacturonase At1g48100(LOC108452405)	coding protein	psRNATarget
XM_017764035.1	ncRNA:21   UGAAGGUUGGAAGGUUAUAGC   1   *||||=*|||||||||||||* targets:868   UCUUCUCACCUUCCAAUAUCA   888 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum hexokinase-1-like (LOC108463991), mRNA	hexokinase-1-like(LOC108463991)	coding protein	psRNATarget