ncRNA ID | novel_gar_miR1423 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:42292688-42292759 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180719 |
Length | 21 |
Mature sequence(if miRNA) | 52 - UGACAUGGCAAAAAUGCUCCC - 72 |
Stem-loop(if miRNA) |
--              CA        ----       C   GAGUGUUUUUGCCA  UCAGCAAA    GCGUCUU A   ||||||||||||||  ||||||||    |||||||   CUCGUAAAAACGGU  AGUUGUUU    CGCGGGA U CC              AC        UUAG       G |
Stem-loop sequence | GAGUGUUUUUGCCACAUCAGCAAAGCGUCUUCAUGAGGGCGCGAUUUUUGUUGACAUGGCAAAAAUGCUCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017776740.1 |
|
2.5 | PREDICTED: Gossypium arboreum bifunctional phosphatase IMPL2, chloroplastic (LOC108474730), mRNA | bifunctional phosphatase IMPL2, chloroplastic(LOC108474730) | coding protein | psRNATarget |