Search result

BaseInfo

ncRNA ID ath-miRf11083-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - GUGAUGUCCUCUACUCGACC - NA
Stem-loop(if miRNA)   U  AGUA  G     -CU          AG          -----------     G
GG GA    GU AUGUC   CUACUCGACC  GGGGUCGAGU           GAUCU U
|| ||    || |||||   ||||||||||  ||||||||||           |||||
CC CU    UA UACAG   GGUGAGUUGG  CUCCAGCUCA           CUAGA U
  -  -GCC  G     UUU          GG          UCUUCGAAGUU     G
Stem-loop sequence GGUGAAGUAGUGAUGUCCUCUACUCGACCAGGGGGUCGAGUGAUCUGUUGAGAUCUUGAAGCUUCUACUCGACCUCGGGGUUGAGUGGUUUGACAUGAUCCGUCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183042.1
ncRNA:20   CCAGCUCAUCUCCUGUAGUG   1
  ||||||||||||||||||||
targets:1585   GGUCGAGUAGAGGACAUCAC   1604

0.0 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
EF183194.1
ncRNA:20   CCAGCUCAUCUCCUGUAGUG   1
  |||||||||||*||||||||
targets:463   GGUCGAGUAGAAGACAUCAC   482

1.5 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
AY227642.1
ncRNA:20   CCAGCUCAUCUCCUGUAGUG   1
  ||||||||||||*|||||||
targets:822   GGUCGAGUAGAGCACAUCAC   841

1.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget