ncRNA ID | novel_gar_miR1421 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:24912186-24912390 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180719 |
Length | 24 |
Mature sequence(if miRNA) | 182 - UCACGUGACAUAUUGAAAGGCUGC - 205 |
Stem-loop(if miRNA) |
AACU     --     C               A          AAU       CUA        A    -    CAAAA          A     ----       U     UCUUU  GUAUG CAUGUGACAAGUAUA AUUUUAAAAA   AAAAAAU   UAAAAAUA AUAA UUAA     AAGAAUAUAA UUUUU    GUGGAGG U     |||||  ||||| ||||||||||||||| ||||||||||   |||||||   |||||||| |||| ||||     |||||||||| |||||    ||||||| C     GGAAA  UAUAC GUGCACUGUUUAUAU UAAAAUUUUU   UUUUUUA   AUUUUUAU UAUU AAUU     UUUUUAUAUU AAAAA    UACUUCU A CGUC     GU     A               A          AAU       --A        A    U    ---AA          A     AGUG       U |
Stem-loop sequence | AACUUCUUUGUAUGCCAUGUGACAAGUAUAAAUUUUAAAAAAAUAAAAAAUCUAUAAAAAUAAAUAAUUAACAAAAAAGAAUAUAAAUUUUUGUGGAGGUUCAUUCUUCAUGUGAAAAAAAUUAUAUUUUUAAUUAAUUUAUAUAUUUUUAAAUUUUUUUAAUUUUUAAAAUAUAUAUUUGUCACGUGACAUAUUGAAAGGCUGC |