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BaseInfo

ncRNA ID novel_gar_miR1418
Species Gossypium arboreum
Class miRNA
Genome position Chr2:69749234-69749415 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180719
Length 24
Mature sequence(if miRNA) 159 - UUAAAAUUGGCAUAAUAGUAACUU - 182
Stem-loop(if miRNA) --             A U              AC          AAUUA               A   C          UU  -AAU UA G
  UUAAAAUUGGCAU A AGUAACUUUAACCC  AAUAUUUAUA     UGUCAAUUUAGUCUU GUU UAAAAGAUUU  AC    A  A U
  ||||||||||||| | ||||||||||||||  ||||||||||     ||||||||||||||| ||| ||||||||||  ||    |  |
  AAUUUUAACCGUA U UCAUUGAAAUUGGG  UUAUAAAUAU     ACAGUUAAAUCAGAA UAA AUUUUUUAAA  UG    U  U A
AA             A C              AA          GUUAC               C   A          -U  GAGU GC A
Stem-loop sequence UUAAAAUUGGCAUAAUAGUAACUUUAACCCACAAUAUUUAUAAAUUAUGUCAAUUUAGUCUUAGUUCUAAAAGAUUUUUACAAUAUAAGUAAUCGUUGAGGUUAAAUUUUUUAAAAUCAAGACUAAAUUGACACAUUGUAUAAAUAUUAAGGGUUAAAGUUACUCUAAUGCCAAUUUUAAAA