ncRNA ID | novel_gar_miR1409 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:22022991-22023045 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180719;SRR3180721 |
Length | 19 |
Mature sequence(if miRNA) | 1 - AAGUCAUUUUCCGAAAAAG - 19 |
Stem-loop(if miRNA) |
--     UCAU            C   U   UUUUC    AAAAUGACUUAU CUU U   |||||    |||||||||||| ||| A   AAAAG    UUUUACUGAAUA GAA A GA     --CC            U   A |
Stem-loop sequence | UUUUCUCAUAAAAUGACUUAUCCUUUUAAAAAGUAUAAGUCAUUUUCCGAAAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017788782.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108484897 (LOC108484897), mRNA | uncharacterized LOC108484897(LOC108484897) | coding protein | psRNATarget |