ncRNA ID | novel_gar_miR1404 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:54898806-54898860 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180719 |
Length | 19 |
Mature sequence(if miRNA) | 37 - AAGUCAUUUUCCGAAAAAG - 55 |
Stem-loop(if miRNA) |
--     CU U            C   U   UUUUC  G AAAAUGACUUAC CUU U   |||||  | |||||||||||| ||| G   AAAAG  C UUUUACUGAAUG GAA A GA     -C -            C   A |
Stem-loop sequence | UUUUCCUGUAAAAUGACUUACCCUUUUGAAAAGCGUAAGUCAUUUUCCGAAAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017788782.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108484897 (LOC108484897), mRNA | uncharacterized LOC108484897(LOC108484897) | coding protein | psRNATarget |