ncRNA ID | novel_gar_miR1402 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:36848772-36848907 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGCGGAUCGGUACGACGGAGCCU - 24 |
Stem-loop(if miRNA) |
--   CG       A   C    -  UCUC   GA    GCAUUUAUAAAUUG      ----       UUUU    U   AGG  GAUCGGU CGA GGAG CC    AGU  CCAC              GUUACA    UUUAUGG    AAUU A   |||  ||||||| ||| |||| ||    |||  ||||              ||||||    |||||||    ||||   UCC  UUGGUCA GUU UUUC GG    UCA  GGUG              CAAUGU    AGGUAUC    UUAG A UU   UU       -   -    A  UCUU   --    ------------AA      UUUU       -CUU    A |
Stem-loop sequence | AGGCGGAUCGGUACGACGGAGCCUCUCAGUGACCACGCAUUUAUAAAUUGGUUACAUUUAUGGUUUUAAUUUAAAGAUUUUCCUAUGGAUUUUUGUAACAAGUGGACUUUCUGGACUUUUUGACUGGUUUUCCUUU |