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BaseInfo

ncRNA ID novel_gar_miR1402
Species Gossypium arboreum
Class miRNA
Genome position Chr10:36848772-36848907 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - AGGCGGAUCGGUACGACGGAGCCU - 24
Stem-loop(if miRNA) --   CG       A   C    -  UCUC   GA    GCAUUUAUAAAUUG      ----       UUUU    U
  AGG  GAUCGGU CGA GGAG CC    AGU  CCAC              GUUACA    UUUAUGG    AAUU A
  |||  ||||||| ||| |||| ||    |||  ||||              ||||||    |||||||    ||||
  UCC  UUGGUCA GUU UUUC GG    UCA  GGUG              CAAUGU    AGGUAUC    UUAG A
UU   UU       -   -    A  UCUU   --    ------------AA      UUUU       -CUU    A
Stem-loop sequence AGGCGGAUCGGUACGACGGAGCCUCUCAGUGACCACGCAUUUAUAAAUUGGUUACAUUUAUGGUUUUAAUUUAAAGAUUUUCCUAUGGAUUUUUGUAACAAGUGGACUUUCUGGACUUUUUGACUGGUUUUCCUUU