ncRNA ID | novel_gar_miR1401 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:63700296-63700355 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180719 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUACCAAAAUAUCUAAGGAU - 21 |
Stem-loop(if miRNA) |
--   A                    - UU   UUU CCAAAAUAUCUAAGGAUUUA C  U   ||| |||||||||||||||||||| |  C   AAA GGUUUUAUAGAUUCCUAAAU G  U GA   C                    A UU |
Stem-loop sequence | UUUACCAAAAUAUCUAAGGAUUUACUUUCUUUGAUAAAUCCUUAGAUAUUUUGGCAAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017791195.1 |
|
3.0 | PREDICTED: Gossypium arboreum serine/threonine-protein kinase tricorner-like (LOC108487002), transcript variant X2, mRNA | serine/threonine-protein kinase tricorner-like(LOC108487002) | coding protein | psRNATarget |