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BaseInfo

ncRNA ID novel_gar_miR1393
Species Gossypium arboreum
Class miRNA
Genome position Chr4:123526670-123526788 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - AUUGUUCUGGUUUGGAGCUUGUGA - 24
Stem-loop(if miRNA) --                       A                AA     UGAAGGAUGAU
  AUUGUUCUGGUUUGGAGCUUGUG CUUGUUAACUUCAUAA  CAUUC           A
  ||||||||||||||||||||||| ||||||||||||||||  |||||
  UAACAAGACCAAACCUUGAGCAC GAACAAUUGAAGUAUU  AGUAU           A
GU                       A                -C     UAGUAUGCUUA
Stem-loop sequence AUUGUUCUGGUUUGGAGCUUGUGACUUGUUAACUUCAUAAAACAUUCUGAAGGAUGAUAAAUUCGUAUGAUUAUGACUUAUGAAGUUAACAAGACACGAGUUCCAAACCAGAACAAUUG