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BaseInfo

ncRNA ID novel_gar_miR1392
Species Gossypium arboreum
Class miRNA
Genome position Chr13:102753282-102753377 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180719
Length 21
Mature sequence(if miRNA) 76 - GAUGGGUGAGGGGGUAAGACA - 96
Stem-loop(if miRNA) --G       -  GG         A     UGUUU        -----------  G
   AUGGGUG AG  GGUAAGACA UGGAC     CAGUCUUU           UG A
   ||||||| ||  ||||||||| |||||     ||||||||           ||
   UACCCGC UC  CCGUUCUGU AUUUG     GUCGGAAG           AC A
CCG       C  AU         -     -----        AAGAAAUAAAG  A
Stem-loop sequence GAUGGGUGAGGGGGUAAGACAAUGGACUGUUUCAGUCUUUUGGAAACAGAAAUAAAGAAGAAGGCUGGUUUAUGUCUUGCCUACUCCGCCCAUGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017754789.1
ncRNA:21   ACAGAAUGGGGGAGUGGGUAG   1
  |*||||*||||||||||||||
targets:412   UCUCUUUCCCCCUCACCCAUC   432

1.0 PREDICTED: Gossypium arboreum uncharacterized LOC108456191 (LOC108456191), mRNA uncharacterized LOC108456191(LOC108456191) coding protein psRNATarget