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BaseInfo

ncRNA ID	novel_gar_miR1389
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr12:144046431-144046526 [-]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180719
Length	19
Mature sequence(if miRNA)	1 - AAGUCAUUUUUCGGAAAAG - 19
Stem-loop(if miRNA)	--UCAA              --CAGG      UAAAA       U   UC       CGAAAAAUGACUUA      UCAAAG     UAAGUCA UUU  C       ||||||||||||||      ||||||     ||||||| |||       GCUUUUUACUGAAU      AGUUUU     AUUCAGU AAA  U GAAAAG              ACGAAA      --CCC       U   UG
Stem-loop sequence	UCAACGAAAAAUGACUUACAGGUCAAAGUAAAAUAAGUCAUUUUUCCUGUAAAUUGACUUACCCUUUUGAAAAGCAUAAGUCAUUUUUCGGAAAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017785795.1	ncRNA:19   GAAAAGGCUUUUUACUGAA   1   *|||||||||||||||=|| targets:834   AUUUUCCGAAAAAUGAUUU   852 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum probable ribonuclease P/MRP protein subunit POP5 (LOC108482673), transcript variant X2, mRNA	probable ribonuclease P/MRP protein subunit POP5(LOC108482673)	coding protein	psRNATarget
XM_017785794.1	ncRNA:19   GAAAAGGCUUUUUACUGAA   1   *|||||||||||||||=|| targets:858   AUUUUCCGAAAAAUGAUUU   876 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum probable ribonuclease P/MRP protein subunit POP5 (LOC108482673), transcript variant X1, mRNA	probable ribonuclease P/MRP protein subunit POP5(LOC108482673)	coding protein	psRNATarget
XM_017790478.1	ncRNA:19   GAAAAGGCUUUUUACUGAA   1   *||*|=||||||||||||| targets:858   AUUGUUCGAAAAAUGACUU   876 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum beta-glucosidase BoGH3B-like (LOC108486426), mRNA	beta-glucosidase BoGH3B-like(LOC108486426)	coding protein	psRNATarget