ncRNA ID | novel_gar_miR1386 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:120502296-120502378 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180719 |
Length | 24 |
Mature sequence(if miRNA) | 60 - AGGAUGAAAAUACUGAUAUGGCAU - 83 |
Stem-loop(if miRNA) |
--A   C       A            ---UUUUA      UU    CCA AUCAGUA UUUCAUCCUGAA        GGAUUU  A    ||| ||||||| ||||||||||||        ||||||    GGU UAGUCAU AAAGUAGGACUU        UUUAGA  G UAC   A       A            UUUUUUAG      UU |
Stem-loop sequence | ACCACAUCAGUAAUUUCAUCCUGAAUUUUAGGAUUUUUAGUUAGAUUUGAUUUUUUUUCAGGAUGAAAAUACUGAUAUGGCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017747330.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108449938 (LOC108449938), transcript variant X1, mRNA | uncharacterized LOC108449938(LOC108449938) | coding protein | psRNATarget |