ncRNA ID | novel_gar_miR1384 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:48717374-48717555 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180719;SRR3180721 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CAUCGAUAGUUUGAGGAUGUA - 21 |
Stem-loop(if miRNA) |
--                  A      C   A  GC    CC    -CU                C         G  G               CAUUCUCAAACUAUCGAU UUAUAU AAU AG  CCUU  GUUA   AAAUCGUUAAUUUAAC GUUAAAUGA AU UGAGAUUUUAUGU   |||||||||||||||||| |||||| ||| ||  ||||  ||||   |||||||||||||||| ||||||||| || ||||||||||||G   GUAGGAGUUUGAUAGCUA AAUAUA UUA UU  GGAA  UAAU   UUUGGUAAUUAAAUUG UAAUUUACU UG AUUCUAGGAUAUA AU                  C      U   G  UA    UA    AAC                U         G  A             |
Stem-loop sequence | CAUUCUCAAACUAUCGAUAUUAUAUCAAUAAGGCCCUUCCGUUACUAAAUCGUUAAUUUAACCGUUAAAUGAGAUGUGAGAUUUUAUGUGAUAUAGGAUCUUAAGUGUCAUUUAAUUGUUAAAUUAAUGGUUUCAAUAAUAUAAGGAUUUGAUUUAUAUAACAUCGAUAGUUUGAGGAUGUA |