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BaseInfo

ncRNA ID	novel_gar_miR1383
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr10:23713138-23713243 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180719
Length	24
Mature sequence(if miRNA)	83 - AGAGGAAAAAUCUGAUUUGUCAUU - 106
Stem-loop(if miRNA)	--                     A     A      UUUUUCCUCCUCAAAAA   UGACAAAUCAGGUUUUUUCUC UGAUU UUUAGU                 A   ||||||||||||||||||||| ||||| ||||||                 U   ACUGUUUAGUCUAAAAAGGAG ACUAA AAAUCA                 U UU                     A     -      UAAACAUCAACCUAAAC
Stem-loop sequence	UGACAAAUCAGGUUUUUUCUCAUGAUUAUUUAGUUUUUUCCUCCUCAAAAAAUUCAAAUCCAACUACAAAUACUAAAAAUCAAGAGGAAAAAUCUGAUUUGUCAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017763570.1	ncRNA:24   UUACUGUUUAGUCUAAAAAGGAGA   1   |||-|||||||||||||||||||* targets:1816   AAU-ACAAAUCAGAUUUUUCCUCA   1838 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum tRNA-splicing endonuclease subunit Sen2-1-like (LOC108463678), transcript variant X1, mRNA	tRNA-splicing endonuclease subunit Sen2-1-like(LOC108463678)	coding protein	psRNATarget
XM_017763572.1	ncRNA:24   UUACUGUUUAGUCUAAAAAGGAGA   1   |||-|||||||||||||||||||* targets:1827   AAU-ACAAAUCAGAUUUUUCCUCA   1849 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum tRNA-splicing endonuclease subunit Sen2-1-like (LOC108463678), transcript variant X3, mRNA	tRNA-splicing endonuclease subunit Sen2-1-like(LOC108463678)	coding protein	psRNATarget
XM_017763571.1	ncRNA:24   UUACUGUUUAGUCUAAAAAGGAGA   1   |||-|||||||||||||||||||* targets:1828   AAU-ACAAAUCAGAUUUUUCCUCA   1850 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum tRNA-splicing endonuclease subunit Sen2-1-like (LOC108463678), transcript variant X2, mRNA	tRNA-splicing endonuclease subunit Sen2-1-like(LOC108463678)	coding protein	psRNATarget