ncRNA ID | novel_gar_miR1382 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:102092640-102092844 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180719 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AAUGUGUCAUAUUAACAAUCCGU - 23 |
Stem-loop(if miRNA) |
--      C   C         --------          GU G           --G            AUAA           AUG    GAAUU    CAAAACU   GGAUUG UGA AUGGCACAU        UGAGUGAUUG  G GUGGCAUUUUU   GUUGACUUUUGA    AGUUUAGGGAC   UUUA     AGUC       U   |||||| ||| |||||||||        ||||||||||  | |||||||||||   ||||||||||||    |||||||||||   ||||     ||||       U   CCUAAC AUU UACUGUGUA        ACUCAUUAAC  U UAUUGUAAGAA   UAACUGGAAACU    UCGAAUCCCUG   AGAU     UCAG       U UG      A   A         AUCGAAUA          UG A           AAA            GAGA           AAA    --AUU    AUCCCCC |
Stem-loop sequence | GGAUUGCUGACAUGGCACAUUGAGUGAUUGGUGGGUGGCAUUUUUGGUUGACUUUUGAAUAAAGUUUAGGGACAUGUUUAGAAUUAGUCCAAAACUUUUCCCCCUAGACUUUAUAGAAAAGUCCCUAAGCUAGAGUCAAAGGUCAAUAAAAAGAAUGUUAUAUGUCAAUUACUCAAUAAGCUAAUGUGUCAUAUUAACAAUCCGU |