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BaseInfo

ncRNA ID novel_gar_miR1382
Species Gossypium arboreum
Class miRNA
Genome position Chr12:102092640-102092844 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180719
Length 23
Mature sequence(if miRNA) 1 - AAUGUGUCAUAUUAACAAUCCGU - 23
Stem-loop(if miRNA) --      C   C         --------          GU G           --G            AUAA           AUG    GAAUU    CAAAACU
  GGAUUG UGA AUGGCACAU        UGAGUGAUUG  G GUGGCAUUUUU   GUUGACUUUUGA    AGUUUAGGGAC   UUUA     AGUC       U
  |||||| ||| |||||||||        ||||||||||  | |||||||||||   ||||||||||||    |||||||||||   ||||     ||||       U
  CCUAAC AUU UACUGUGUA        ACUCAUUAAC  U UAUUGUAAGAA   UAACUGGAAACU    UCGAAUCCCUG   AGAU     UCAG       U
UG      A   A         AUCGAAUA          UG A           AAA            GAGA           AAA    --AUU    AUCCCCC
Stem-loop sequence GGAUUGCUGACAUGGCACAUUGAGUGAUUGGUGGGUGGCAUUUUUGGUUGACUUUUGAAUAAAGUUUAGGGACAUGUUUAGAAUUAGUCCAAAACUUUUCCCCCUAGACUUUAUAGAAAAGUCCCUAAGCUAGAGUCAAAGGUCAAUAAAAAGAAUGUUAUAUGUCAAUUACUCAAUAAGCUAAUGUGUCAUAUUAACAAUCCGU