| ncRNA ID | novel_gar_miR1375 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr11:88748120-88748300 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180719 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAGAAAUGGAGAAUGUAGGAAAAC - 24 |
| Stem-loop(if miRNA) |
-- C C A A G A A U UAU UAU ---U U UUUCCUAC UUCUCCAUUUUUUUUAACAUAU AGGAAGUU AAU G CA UGAAGAAAGAA CA GG GAGUU GAGUU UUGU A |||||||| |||||||||||||||||||||| |||||||| ||| | || ||||||||||| || || ||||| ||||| |||| U AAAGGAUG AAGAGGUAAAGAAAAUUGUAUA UCCUUCAA UUA C GU ACUUUUUUCUU GU CC UUCGG UUCAG AACG A CA U C C A G C C - --- -UU UAGU G |
| Stem-loop sequence | UUUCCUACCUUCUCCAUUUUUUUUAACAUAUCAGGAAGUUAAAUAGGCAAUGAAGAAAGAAACAUGGUAUGAGUUUAUGAGUUUUUGUUAUAGGCAAUGAUGACUUUUGGCUUCCUGCUUCUUUUUUCACUGGCAAUUCAACUUCCUCAUAUGUUAAAAGAAAUGGAGAAUGUAGGAAAAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017752721.1 |
|
2.5 | PREDICTED: Gossypium arboreum pentatricopeptide repeat-containing protein At5g66520-like (LOC108454303), mRNA | pentatricopeptide repeat-containing protein At5g66520-like(LOC108454303) | coding protein | psRNATarget |