ncRNA ID |
ath_circ_035854 |
Species |
Arabidopsis thaliana |
Class |
circRNA |
Genome position |
M:296252-297861[-] |
Reference genome |
TAIR10 |
Source |
PlantcircBase
|
Method |
NA |
Type |
exonic |
Splice junction sequence |
CTCTCCATAATAATAGGATCCACCAATTCTTCTGCGAGAGCTACTGTACCCGAACAGTAGAAGGGGTGGTTAATTATGGTGTCTACTGATATATTAGGAAATCCAATTCTCGCTGGAGGTTCCTAATATATCCGGCCTGAATCACTCCCTCGTAAAAATCCCAGCGCATATTAACTAAGAAGTGATTCAACCGGGTTAAC |
Tissues |
leaf, aerial, inflorescences, whole_plant |
Exon boundary |
No-No |
Splicing signals |
AC-CT |
circRNA sequence |
NA |
Genomic sequence |
CTCTCCATAATAATAGGATCCACCAATTCTTCTGCGAGAGCTACTGTACCCGAACAGTAGAAGGGGTGGTTAATTATGGTGTCTACTGATATATTAGGAAACATGTCCAGAACTGGCACTCCTGGCAGAACGTCGTTATCTGCAGAATTCGTGGAACTGGCAAAAAGTAGATTCAGATTTCTCTGTCGTCGCATAGCTTATCCCCATTTTTTTTTCAGCAACTGAACGGGAAGTGGCTTAGGAAAGGACTAATCGGATGCGCTCGCCCAGCGAGAAAGGCCCTAACCCTTGCCGACCAAGAAAAAAAGAGAAGATAACGAAAGGGAGACAAAGTTCCTAACAAAATCATAACACAAGGTACCCATTCCATCTATCATATCAGTCGAGTCGATCCGATTCGTTCTTATCAGGCGGCAAGAGAGAACTTATGACTTCGCGGATGGAGAGGGATTCGAACCCCCGGTATTCCTAGAAATACTTCGGTTTTCAAGACCGACTCTTTCAACCGCTCAGACATCCATCCCTCGCTTTTGTTCAATTATAAATATAAATAAAAGAAAGAAGAACTTTAATGGAGATTTATAGCATCATTCAAGTAAATACAGATTAAGATCGTAAAAACATAAGCTTGTAATATAGCTACACCTAATTCCAGACCGGTTAATGCAAGAACTATAAATAAAGGACCAAGAGCCCCTATAAAATAGAAAATATCATTCATACATAGCATAGTCCAAGCGAACCCACTTAAAATCTTTACTAAACTATGACCGGCCATCATATTAGCAAATAAACGTATTCCTAAGCTTAATGCGCGAAAACAATAAGAAATTAGCTCAAGGAGTACTAAAAAAGGTGCTAACGGCAGTGGGACTCCTGCGGGTAATAAAAAGCTGAAAAAATGAAGCCCATGTCTTTGAAATCCCACTATAGTAATGCCAATAAAAATCGAAAATGAGAGAGCCAAAGTAATGAGAAAATGACTTGTCACTGTGAAGCTATAAGGTATCATACCCTGAAGATTACAAAATAACAAAAAAAGAAAAGTGACCAAGATGCAAGGGAAAAACATTTGTTTCACATTCCCGGAAAGACCACCTATTTGTTCCTTTACCAGGTTCAGCACGAAATCATAAAGAAGCTCTACCAAGGATTGCCAAGCATTTGGGACTAAGTTTCCTCCTCCCTTTTTAGTAACAAAATGAATCAGAAGTAGGAAAAAACTCAGAGTTAGCAGCATGAACAAAGATGGATTTGTGAATGAGAAATAGAAGTTTCCGATATGCATAGGAATCAATGGGACAATCTCAAATTGGTCCAGTGGGGAGGGGATTTCCATAAGTTTCATATAGTTAGAAAAACAGGCGTCGTGATATTTTTCAATAAAATTGACAGGGCCAGGAACGCCCAAATTCTGCATATACCAGTTATTAACGTACGTAGATAAATTAAGCGATTCCCTAAAAAAAATAAGGTCCAGTTTGCTCCCGAGGAGTTCCGCGGGAGTATGATCCAATTCTCGCTGGAGGTTCCTAATATATCCGGCCTGAATCACTCCCTCGTAAAAATCCCAGCGCATATTAACTAAGAAGTGATTCAACCGGGTTAAC |