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BaseInfo

ncRNA ID novel_gar_miR1370
Species Gossypium arboreum
Class miRNA
Genome position Chr1:31470539-31470718 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180719
Length 22
Mature sequence(if miRNA) 1 - GUUUUAGUUUGGAUUGAGGUUU - 22
Stem-loop(if miRNA) --     GU   U     -----U    AUUAUCC    --   UAGAUGGUUUAGAGCUGCAAGGGACUCGGGGAUGGCCACACUACUAUUUCUGC
  ACUUU  UUC AACUG      GCAG       CUAG  GCU                                                     U
  |||||  ||| |||||      ||||       ||||  |||
  UGGAG  AGG UUGAU      UUUU       GGGU  UUG                                                     U
UU     UU   U     UUUGAA    -------    GG   CCGGAAUAAUGUAUUUAAUUUUGGGUUUUGCUUUUAGAUAAUCGUUAAACUUC
Stem-loop sequence ACUUUGUUUCUAACUGUGCAGAUUAUCCCUAGGCUUAGAUGGUUUAGAGCUGCAAGGGACUCGGGGAUGGCCACACUACUAUUUCUGCUUCUUCAAAUUGCUAAUAGAUUUUCGUUUUGGGUUUUAAUUUAUGUAAUAAGGCCGUUGGUGGGUUUUAAGUUUUAGUUUGGAUUGAGGUUU