ncRNA ID | novel_gar_miR1368 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:93468094-93468159 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180719;SRR3180721 |
Length | 21 |
Mature sequence(if miRNA) | 46 - CGAGCCGAAUCAAUAUCACUC - 66 |
Stem-loop(if miRNA) |
--                  AU   AUU  GAU   GUGAUAUUGGUUCGGCUC  CUU   GU   U   ||||||||||||||||||  |||   ||   CACUAUAACUAAGCCGAG  GAA   UA   A CU                  CG   CUU  AAA |
Stem-loop sequence | GUGAUAUUGGUUCGGCUCAUCUUAUUGUGAUUAAAAAUUUCAAGGCGAGCCGAAUCAAUAUCACUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017789517.1 |
|
2.5 | PREDICTED: Gossypium arboreum nodulation-signaling pathway 2 protein-like (LOC108485665), mRNA | nodulation-signaling pathway 2 protein-like(LOC108485665) | coding protein | psRNATarget | |||||||||
XM_017750598.1 |
|
2.5 | PREDICTED: Gossypium arboreum nodulation-signaling pathway 2 protein (LOC108452807), mRNA | nodulation-signaling pathway 2 protein(LOC108452807) | coding protein | psRNATarget |