ncRNA ID |
ath_circ_035791 |
Species |
Arabidopsis thaliana |
Class |
circRNA |
Genome position |
M:40595-41929[-] |
Reference genome |
TAIR10 |
Source |
PlantcircBase
|
Method |
NA |
Type |
intronic |
Splice junction sequence |
GCTTTCTTTGGCATCTATGCCCCCTGCCCTCCAAACAGTATGGGAGCCTTTCAGCTCGTACTGCTCACACTCCTAGATCTTCACGGCACCTCCTCCACCACGCTCACTGTAATAGCTTGCTTCTCGGGTGGCTCGCACCCCGGGTGGTGCGGCTGAGCCAGAGTGGGGCTCAACAGTCGGCCTATGTTTCCGGGCGCACG |
Tissues |
root, aerial, whole_plant |
Exon boundary |
No-Yes |
Splicing signals |
CA-CG |
circRNA sequence |
NA |
Genomic sequence |
GCTTTCTTTGGCATCTATGCCCCCTGCCCTCCAAACAGTATGGGAGCCTTTCAGCTCGTACTGCTCACACTCCTAGATCTTCACGGCACCTCCTCCACCATAGTGTGAGCTGCTCCCAGCGGAGAAAAGCAAGGCCTACTTCCTAATTAGCTTTCAACAACGTCAACAACACCACGAAAAAAGTAAACAATGGTTGCCCACTAATCTGATCATAGGTGAAATCCAATCCCTTCGCTTCGCGCCAGGCTTTGAAACCGTAAGTCAGGCTCCTTTCGCCTCTCCTTTCAGTCGAGTCACGTCAGTACCTCTCAGAAGCGAGAAAGCGAGCAGCAAGCTGAAAAAAGGAGAAAGTGGTTTTATAAAGCAAAATAAGCTAAGGGGGCTGGCTAGGAATCGCAAGAATTGAGAAGGGTGGGAAAGACAGGTTCGGTAATGGCCGGATTAGCAGGAGGAAGGTCTTGAAGAGCCTGAAACAAAGAAAGGTGTACATAAAAAAAGAGGCTGGTTATGGCCTTTACTTGATAGGACTCCTTTCCCATCCCGGGAAGAGGGGATAAAAAAAACCTTGCGGAAGCCCTGCCCACCCTTCCGGATCCCTCATATTTATGATTCCAGGCTTCCCGGACTCGTAATAGACGGCTAAGAACAAGAAGAGGGTCAGTAGTCTCTGCCGTTGCAGGTCCTTCTCCTTCCGCTGAGACGGCCCTCTTTTTTTGTTTGTTCACCGCGGCACGAAATCGAAATCATGAAGAAGCTGGAATAACTCAGAAAGAGAGTGGCGCCTAGCCGTTGAGAGCGTCTATTATCTTTGTAGAGGAACAGTACGATCTTGGACTGGCCCCCTTCGCATGACCTAGAAAGATCAAGAAGTCCATGCTACTATAAGGCCTCTAAACTCCTCCCTCAGGACACTATTGCCCATGGGGACGGGGTAGCCCCGACTTCCATAGGTCCTTGGTTCGACCTCCTAATGAGAATTGAGGTCCTTGCGCGGGCGTCTCATCCCTAAGACTTGCTTGCTCTGTATGGAGTGCCCTGTGGTTCCTCGAGTGCCAGCCGCAGAGAGGAATGCCATCAACTAGGGCGCTATTGGCCACTAACCACTCGCTCGCCAGCCGCTCGGGCTCCGCGTTTCAAGTTCGTTATCCTAACCGTCCCCTCTGCTCCACCGGGTGCCTGGCCCTTTTCTTCTATCTTATCTACTACCTTGCTCCTCGGCTCCCTACAGCTCCAGCCGCTCACTGTAATAGCTTGCTTCTCGGGTGGCTCGCACCCCGGGTGGTGCGGCTGAGCCAGAGTGGGGCTCAACAGTCGGCCTATGTTTCCGGGCGCACG |