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BaseInfo

ncRNA ID novel_gar_miR1367
Species Gossypium arboreum
Class miRNA
Genome position Chr11:10287166-10287207 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180719;SRR3180721
Length 19
Mature sequence(if miRNA) 24 - AAGUCAUUUUCAGGAAAAG - 42
Stem-loop(if miRNA) -A     A     CC     G
  UUUCU GGAAA  GAUUU A
  ||||| |||||  |||||
  AAAGG CUUUU  CUGAA U
GA     A     -A     U
Stem-loop sequence AUUUCUAGGAAACCGAUUUGAUUAAGUCAUUUUCAGGAAAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017771867.1
ncRNA:19   GAAAAGGACUUUUACUGAA   1
  =|||||||||||||||=||
targets:1781   UUUUUCCUGAAAAUGAUUU   1799

2.5 PREDICTED: Gossypium arboreum RNA-binding protein BRN1-like (LOC108470523), mRNA RNA-binding protein BRN1-like(LOC108470523) coding protein psRNATarget