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BaseInfo

ncRNA ID	novel_gar_miR1366
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr11:83429924-83430084 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180719
Length	23
Mature sequence(if miRNA)	139 - UUAGAAAGGGAUACAGAUGACGU - 161
Stem-loop(if miRNA)	--                  C                                                 UC     AAA   GUCAUCUGUAUCCCUUUC AAUAGUUUUAUGCCACAUCAGUAUUCUUAUCCUGAAUUUCAGGAUUUUA  UUGAA   A   |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||   U   CAGUAGACAUAGGGAAAG UUAUCAAAAUACGGUGUAGUCAUAAGAAUAGGACUUAAAGUCCUAAAAU  AACUU   A UG                  A                                                 UA     AAA
Stem-loop sequence	GUCAUCUGUAUCCCUUUCCAAUAGUUUUAUGCCACAUCAGUAUUCUUAUCCUGAAUUUCAGGAUUUUAUCUUGAAAAAAUAAAAUUCAAAUUAAAAUCCUGAAAUUCAGGAUAAGAAUACUGAUGUGGCAUAAAACUAUUAGAAAGGGAUACAGAUGACGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017758885.1	ncRNA:23   UGCAGUAGACAUAGGGAAAGAUU   1   ||||||||||||||||||||*|| targets:1637   ACGUCAUCUGUAUCCCUUUCCAA   1659 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA	enolase-like(LOC108459500)	coding protein	psRNATarget
XM_017759563.1	ncRNA:23   UGCAGUAGACAUAGGGAAAGAUU   1   ||||||||||||||||||||*|| targets:2369   ACGUCAUCUGUAUCCCUUUCCAA   2391 Target Full Sequence	1.5	PREDICTED: Gossypium arboreum L-type lectin-domain containing receptor kinase IX.1-like (LOC108460187), mRNA	L-type lectin-domain containing receptor kinase IX.1-like(LOC108460187)	coding protein	psRNATarget
XM_017762612.1	ncRNA:23   UGCAGUAGACAUAGGGAAAGAUU   1   ***||||||*||||||||*|||| targets:2856   UGUUCAUCUUUAUCCCUUGCUAA   2878 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum probable cellulose synthase A catalytic subunit 5 [UDP-forming] (LOC108462694), mRNA	probable cellulose synthase A catalytic subunit 5 [UDP-forming](LOC108462694)	coding protein	psRNATarget