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BaseInfo

ncRNA ID ath-miRf11077-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UGGUGAUGUCUUCUACUCGACCU - NA
Stem-loop(if miRNA)       - AG    G   U -UU          UG            UCU   GAGA
GAGGUG A  UGGU AUG C   CUACUCGACC  GGGGUCGAGUGG   GUU    U
|||||| |  |||| ||| |   ||||||||||  ||||||||||||   |||
CUUCGC U  ACUA UAC G   GGUGAGCUGG  CUCCAGCUCAUC   CGA    C
      C GG    G   U UUU          GU            -CU   AGUU
Stem-loop sequence GAGGUGAAGUGGUGAUGUCUUCUACUCGACCUGGGGGUCGAGUGGUCUGUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUCGAGUGGUUUGUCAUGAUCAGGUCCGCUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183194.1
ncRNA:23   UCCAGCUCAUCUUCUGUAGUGGU   1
  |||||||||||||||||||||||
targets:462   AGGUCGAGUAGAAGACAUCACCA   484

0.0 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
NM_103391.1
ncRNA:23   UCCAGCUCAUCUUCUGUAGUGGU   1
  |||||||||||||||*|||||||
targets:1117   AGGUCGAGUAGAAGAAAUCACCA   1139

1.5 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget