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BaseInfo

ncRNA ID novel_gar_miR1362
Species Gossypium arboreum
Class miRNA
Genome position Chr6:35948791-35948856 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 24
Mature sequence(if miRNA) 43 - AAAGUCUGUUAACACCUCGUGUUC - 66
Stem-loop(if miRNA) --     C   U         U UU   CU   G
  AAAGU UGU AACACCUCG G  CGA  CCG C
  ||||| ||| ||||||||| |  |||  |||
  UUUUA ACA UUGUGGGGC U  GUU  GGC G
UA     -   -         U GG   CU   A
Stem-loop sequence AAAGUCUGUUAACACCUCGUGUUCGACUCCGGCGACGGUCUUGGGUUCGGGGUGUUACAAUUUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017750228.1
ncRNA:24   CUUGUGCUCCACAAUUGUCUGAAA   1
  |||||||||||||||||=|||||*
targets:1264   GAACACGAGGUGUUAACGGACUUA   1287

2.5 PREDICTED: Gossypium arboreum F-box protein At2g27310-like (LOC108452438), mRNA F-box protein At2g27310-like(LOC108452438) coding protein psRNATarget