ncRNA ID | novel_gar_miR1362 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:35948791-35948856 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 24 |
Mature sequence(if miRNA) | 43 - AAAGUCUGUUAACACCUCGUGUUC - 66 |
Stem-loop(if miRNA) |
--     C   U         U UU   CU   G   AAAGU UGU AACACCUCG G  CGA  CCG C   ||||| ||| ||||||||| |  |||  |||   UUUUA ACA UUGUGGGGC U  GUU  GGC G UA     -   -         U GG   CU   A |
Stem-loop sequence | AAAGUCUGUUAACACCUCGUGUUCGACUCCGGCGACGGUCUUGGGUUCGGGGUGUUACAAUUUUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017750228.1 |
|
2.5 | PREDICTED: Gossypium arboreum F-box protein At2g27310-like (LOC108452438), mRNA | F-box protein At2g27310-like(LOC108452438) | coding protein | psRNATarget |