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BaseInfo

ncRNA ID novel_gar_miR1361
Species Gossypium arboreum
Class miRNA
Genome position Chr6:45832645-45832795 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 21
Mature sequence(if miRNA) 1 - CACUGUCCUUUUUGAACCUUU - 21
Stem-loop(if miRNA) --     UG         AUAAAAAUU      U   -U    UU  GG   --G   U  UU    UAUAGAUUAG    AU
  GGGUU  AGGGGGAUA         UGGAGG GGA  AACU  GA  UCG   GGU GG  UGGA          GGGC  A
  |||||  |||||||||         |||||| |||  ||||  ||  |||   ||| ||  ||||          ||||
  UCCAA  UUUUCCUGU         ACUUCU CUU  UUGG  UU  GGU   CCA CC  ACCU          UUCG  A
UU     GU         --CACGGAU      U   UC    UC  AG   GUA   U  UU    ----------    GU
Stem-loop sequence GGGUUUGAGGGGGAUAAUAAAAAUUUGGAGGUGGAUAACUUUGAGGUCGGGGUUGGUUUGGAUAUAGAUUAGGGGCAUAAUGGCUUUCCAUUCCUACCAUGUGGGAUUCUGGUUCUUUCUUCUUCAUAGGCACUGUCCUUUUUGAACCUUU