ncRNA ID | novel_gar_miR1361 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:45832645-45832795 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CACUGUCCUUUUUGAACCUUU - 21 |
Stem-loop(if miRNA) |
--     UG         AUAAAAAUU      U   -U    UU  GG   --G   U  UU    UAUAGAUUAG    AU   GGGUU  AGGGGGAUA         UGGAGG GGA  AACU  GA  UCG   GGU GG  UGGA          GGGC  A   |||||  |||||||||         |||||| |||  ||||  ||  |||   ||| ||  ||||          ||||   UCCAA  UUUUCCUGU         ACUUCU CUU  UUGG  UU  GGU   CCA CC  ACCU          UUCG  A UU     GU         --CACGGAU      U   UC    UC  AG   GUA   U  UU    ----------    GU |
Stem-loop sequence | GGGUUUGAGGGGGAUAAUAAAAAUUUGGAGGUGGAUAACUUUGAGGUCGGGGUUGGUUUGGAUAUAGAUUAGGGGCAUAAUGGCUUUCCAUUCCUACCAUGUGGGAUUCUGGUUCUUUCUUCUUCAUAGGCACUGUCCUUUUUGAACCUUU |