ncRNA ID | novel_gar_miR1359 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:108980448-108980519 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUGCUGACGUGGACAAAACGCUCC - 24 |
Stem-loop(if miRNA) |
--  UA                        CU   U   AG  UUUUGUCCAUGUUAGCACAAAGCG  UCC U   ||  ||||||||||||||||||||||||  |||   UC  AAAACAGGUGCAGUCGUGUUUCGC  GGG G CC  GC                        AC   A |
Stem-loop sequence | AGUAUUUUGUCCAUGUUAGCACAAAGCGCUUCCUUGAGGGCACGCUUUGUGCUGACGUGGACAAAACGCUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017784438.1 |
|
1.5 | PREDICTED: Gossypium arboreum serine/threonine-protein phosphatase 7 long form homolog (LOC108481281), mRNA | serine/threonine-protein phosphatase 7 long form homolog(LOC108481281) | coding protein | psRNATarget | |||||||||
XM_017780527.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108478102 (LOC108478102), mRNA | uncharacterized LOC108478102(LOC108478102) | coding protein | psRNATarget |