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BaseInfo

ncRNA ID	novel_gar_miR1355
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr6:99024360-99024408 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180715;SRR3180720
Length	24
Mature sequence(if miRNA)	1 - AAUGCUCCGUAACCCUGUUCUGGU - 24
Stem-loop(if miRNA)	--        G      -    C  G   AAUGCUCC UAACCC UGUU UG U   |||||||| |||||| |||| ||   UUGUGGGG AUUGGG AUAA AC G CA        -      C    -  A
Stem-loop sequence	AAUGCUCCGUAACCCUGUUCUGGUGACAAAUACGGGUUAGGGGUGUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017750397.1	ncRNA:24   UGGUCUUGUCCCAAUGCCUCGUAA   1   =|==|||=|||||||||||||||| targets:685   GCUGGAAUAGGGUUACGGAGCAUU   708 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108452575 (LOC108452575), transcript variant X4, mRNA	uncharacterized LOC108452575(LOC108452575)	coding protein	psRNATarget
XM_017750381.1	ncRNA:24   UGGUCUUGUCCCAAUGCCUCGUAA   1   =|==|||=|||||||||||||||| targets:867   GCUGGAAUAGGGUUACGGAGCAUU   890 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108452575 (LOC108452575), transcript variant X2, mRNA	uncharacterized LOC108452575(LOC108452575)	coding protein	psRNATarget
XM_017750389.1	ncRNA:24   UGGUCUUGUCCCAAUGCCUCGUAA   1   =|==|||=|||||||||||||||| targets:869   GCUGGAAUAGGGUUACGGAGCAUU   892 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108452575 (LOC108452575), transcript variant X3, mRNA	uncharacterized LOC108452575(LOC108452575)	coding protein	psRNATarget
XM_017750373.1	ncRNA:24   UGGUCUUGUCCCAAUGCCUCGUAA   1   =|==|||=|||||||||||||||| targets:883   GCUGGAAUAGGGUUACGGAGCAUU   906 Target Full Sequence	1.0	PREDICTED: Gossypium arboreum uncharacterized LOC108452575 (LOC108452575), transcript variant X1, mRNA	uncharacterized LOC108452575(LOC108452575)	coding protein	psRNATarget