ncRNA ID | novel_gar_miR1353 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr6:70372799-70372865 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAGUCUGUUAACACCUCGUGUUC - 24 |
Stem-loop(if miRNA) |
--AAA      U           UU   CU   G      GUCUGU AACACCUCGUG  CGA  CCG C      |||||| |||||||||||  |||  |||      CGGACA UUGUGGGGCAU  GCU  GGC A AUGUA      -           GG   CU   A |
Stem-loop sequence | AAAGUCUGUUAACACCUCGUGUUCGACUCCGGCAACGGUCUCGGGUACGGGGUGUUACAGGCAUGUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017750228.1 |
|
2.5 | PREDICTED: Gossypium arboreum F-box protein At2g27310-like (LOC108452438), mRNA | F-box protein At2g27310-like(LOC108452438) | coding protein | psRNATarget |