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BaseInfo

ncRNA ID	ath-miRf11076-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CUCGACCUGGGGGUCGAGUG - NA
Stem-loop(if miRNA)	UG            UCU   GAGA CUACUCGACC  GGGGUCGAGUGG   GUU    U ||||||||||  ||||||||||||   ||| GGUGAGCUGG  CUCCAGCUCAUC   CGA    C           GU            -CU   AGUU
Stem-loop sequence	CUACUCGACCUGGGGGUCGAGUGGUCUGUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUCGAGUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_103391.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   |||||||||||||||||||| targets:1105   CACUCGACCCCCAGGUCGAG   1124 Target Full Sequence	0.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT025674.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   =||||||||||||||||||| targets:188   UACUCGACCCCCAGGUCGAG   207 Target Full Sequence	0.0	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT014714.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   =||||||||||||||||||| targets:137   UACUCGACCCCCAGGUCGAG   156 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   =||||||||||||||||||| targets:137   UACUCGACCCCCAGGUCGAG   156 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   =|||||||||||*||||||| targets:309   UACUCGACCCCCUGGUCGAG   328 Target Full Sequence	1.5	Arabidopsis thaliana	NA	coding protein	psRNATarget
BT014714.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   ||||||||||||*||||||| targets:231   CACUCGACCCCCUGGUCGAG   250 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   =|||||||||||*||||||| targets:182   UACUCGACCCCCUGGUCGAG   201 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   ||||||||||||*||||||| targets:231   CACUCGACCCCCUGGUCGAG   250 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   =|||||||||||*||||||| targets:182   UACUCGACCCCCUGGUCGAG   201 Target Full Sequence	1.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   ||||||||||||*||||||| targets:91   CACUCGACCCCCUGGUCGAG   110 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   |||||||||*|||||||||| targets:450   CACUCGACCACCAGGUCGAG   469 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   ||||||||||||*||||||| targets:125   CACUCGACCCCCUGGUCGAG   144 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   |||||||||||*|||||||| targets:855   CACUCGACCCCGAGGUCGAG   874 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183193.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   ||||||||||||*||||||| targets:500   CACUCGACCCCCUGGUCGAG   519 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   ||||||||||||*||||||| targets:500   CACUCGACCCCCUGGUCGAG   519 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   ||||||||||||*||||||| targets:1572   CACUCGACCCCCUGGUCGAG   1591 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   |||||||||||*|||||||| targets:1618   CACUCGACCCCGAGGUCGAG   1637 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   |||||||||||*|||||||* targets:1060   CACUCGACCCCGAGGUCGAC   1079 Target Full Sequence	2.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
BT014714.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   =||||*||||||*||||||| targets:302   UACUCAACCCCCUGGUCGAG   321 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   =||||*||||||*||||||| targets:302   UACUCAACCCCCUGGUCGAG   321 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:20   GUGAGCUGGGGGUCCAGCUC   1   =||*||||||||*||||||| targets:584   UACYCGACCCCCUGGUCGAG   603 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget