ncRNA ID | novel_gar_miR1351 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr5:43204928-43204981 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 24 |
Mature sequence(if miRNA) | 31 - AUCGGUCGGUUAACCAAAUUAAUU - 54 |
Stem-loop(if miRNA) |
--                     AUUC   UUAAUUUGGUUAACUGAUCGA    G   |||||||||||||||||||||   AAUUAAACCAAUUGGCUGGCU    G UU                     AAUU |
Stem-loop sequence | UUAAUUUGGUUAACUGAUCGAAUUCGGUUAAUCGGUCGGUUAACCAAAUUAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017793582.1 |
|
2.0 | PREDICTED: Gossypium arboreum lysophospholipid acyltransferase 1-like (LOC108489215), transcript variant X2, mRNA | lysophospholipid acyltransferase 1-like(LOC108489215) | coding protein | psRNATarget |