ncRNA ID | novel_gar_miR1343 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr5:25191093-25191241 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180720 |
Length | 22 |
Mature sequence(if miRNA) | 128 - CAUAUUGGUCUUUUCUGUUAAA - 149 |
Stem-loop(if miRNA) |
--  U          U            U        ----------      AUUAAAAAUUGG  U      UGAAAUAACCCG   CA AUUGGUCUUU CUGUUAAAAAUU UAUUCAUU          UGUACA            UG GGUUAU            A   || |||||||||| |||||||||||| ||||||||          ||||||            || ||||||   GU UAAUCAGAAA GACAAUUUUUAA AUAAGUAA          ACAUGU            UA CUAUAU            U UC  U          -            C        AAAUCGUACU      -----------G  -      GGUGUAUAGUGA |
Stem-loop sequence | CAUAUUGGUCUUUUCUGUUAAAAAUUUUAUUCAUUUGUACAAUUAAAAAUUGGUGUGGUUAUUGAAAUAACCCGAUAGUGAUAUGUGGUAUAUCAUGUGUACAUCAUGCUAAAAAUGAAUACAAUUUUUAACAGAAAGACUAAUUUGCU |