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BaseInfo

ncRNA ID novel_gar_miR1343
Species Gossypium arboreum
Class miRNA
Genome position Chr5:25191093-25191241 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715;SRR3180720
Length 22
Mature sequence(if miRNA) 128 - CAUAUUGGUCUUUUCUGUUAAA - 149
Stem-loop(if miRNA) --  U          U            U        ----------      AUUAAAAAUUGG  U      UGAAAUAACCCG
  CA AUUGGUCUUU CUGUUAAAAAUU UAUUCAUU          UGUACA            UG GGUUAU            A
  || |||||||||| |||||||||||| ||||||||          ||||||            || ||||||
  GU UAAUCAGAAA GACAAUUUUUAA AUAAGUAA          ACAUGU            UA CUAUAU            U
UC  U          -            C        AAAUCGUACU      -----------G  -      GGUGUAUAGUGA
Stem-loop sequence CAUAUUGGUCUUUUCUGUUAAAAAUUUUAUUCAUUUGUACAAUUAAAAAUUGGUGUGGUUAUUGAAAUAACCCGAUAGUGAUAUGUGGUAUAUCAUGUGUACAUCAUGCUAAAAAUGAAUACAAUUUUUAACAGAAAGACUAAUUUGCU