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BaseInfo

ncRNA ID novel_gar_miR1341
Species Gossypium arboreum
Class miRNA
Genome position Chr5:9073140-9073285 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 21
Mature sequence(if miRNA) 126 - UCUCGGACCAGGCUUCAUUCC - 146
Stem-loop(if miRNA) --    UU      CU              UUGAU  -UU        -AUU    U              UUUAU
  AAUG  GUUUGG  CGAGGUCAUAUAGG     CU   UAUAUAUA    UCCA GAAAUUUUCUUGGA     U
  ||||  ||||||  ||||||||||||||     ||   ||||||||    |||| ||||||||||||||     U
  UUAC  CGGACC  GCUCUAGUAUAUCC     GA   AUAUAUGU    AGGU CUUUGAAAGGGCCU     A
CC    UU      AG              ----C  UAU        GUAU    -              UUUAA
Stem-loop sequence AAUGUUGUUUGGCUCGAGGUCAUAUAGGUUGAUCUUUUAUAUAUAAUUUCCAUGAAAUUUUCUUGGAUUUAUUUAAAUUUUCCGGGAAAGUUUCUGGAUAUGUGUAUAUAUAUAGCCCUAUAUGAUCUCGGACCAGGCUUCAUUCC