ncRNA ID | novel_gar_miR1341 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr5:9073140-9073285 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 21 |
Mature sequence(if miRNA) | 126 - UCUCGGACCAGGCUUCAUUCC - 146 |
Stem-loop(if miRNA) |
--    UU      CU              UUGAU  -UU        -AUU    U              UUUAU   AAUG  GUUUGG  CGAGGUCAUAUAGG     CU   UAUAUAUA    UCCA GAAAUUUUCUUGGA     U   ||||  ||||||  ||||||||||||||     ||   ||||||||    |||| ||||||||||||||     U   UUAC  CGGACC  GCUCUAGUAUAUCC     GA   AUAUAUGU    AGGU CUUUGAAAGGGCCU     A CC    UU      AG              ----C  UAU        GUAU    -              UUUAA |
Stem-loop sequence | AAUGUUGUUUGGCUCGAGGUCAUAUAGGUUGAUCUUUUAUAUAUAAUUUCCAUGAAAUUUUCUUGGAUUUAUUUAAAUUUUCCGGGAAAGUUUCUGGAUAUGUGUAUAUAUAUAGCCCUAUAUGAUCUCGGACCAGGCUUCAUUCC |