ncRNA ID | novel_gar_miR1337 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr11:79098572-79098796 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAGAAGAGAUUGUAUGAAACUGUG - 24 |
Stem-loop(if miRNA) |
--      A      A           U    C U         UA     C    G           A    CU    -A               A     -AG     UUUG   GAGAAG GAUUGU UGAAACUGUGA UACA G CAUCCUUAU  CUUUC AAUA GAGAAUGAUAA UUUA  UUUU  CUCUUGAUUUUUAGC UUUUU   UUGGA    A   |||||| |||||| ||||||||||| |||| | |||||||||  ||||| |||| ||||||||||| ||||  ||||  ||||||||||||||| |||||   |||||   CUCUUU CUAACA ACUUUGACAUU AUGU C GUAGGGAUA  GAAAG UUGU CUCUUGCUGUU AAGU  AAAA  GAGGAUUAAAAGUCG AAAGG   AACUU    A UA      C      C           C    A U         GG     A    A           -    UU    AG               G     GAG     UUUU |
Stem-loop sequence | GAGAAGAGAUUGUAUGAAACUGUGAUUACACGUCAUCCUUAUUACUUUCCAAUAGGAGAAUGAUAAAUUUACUUUUUACUCUUGAUUUUUAGCAUUUUUAGUUGGAUUUGAAUUUUUUCAAGAGGGAAAGGCUGAAAAUUAGGAGGAAAAAUUUGAAUUGUCGUUCUCAUGUUAGAAAGGGAUAGGGAUGUCAUGUACUUACAGUUUCACACAAUCCUUUCUCAU |