| ncRNA ID | novel_gar_miR1336 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr4:57021980-57022125 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR3180715;SRR3180720 |
| Length | 21 |
| Mature sequence(if miRNA) | 126 - UAGAAUAGGAAUAUAGAACCU - 146 |
| Stem-loop(if miRNA) |
-- C -UGA C C CAA AU -C A UCAA A UAU GUUUUGU UUCCUAUUCUGUC GGU GGUUUA AGAG GAGU CU GCU GC GUGGU G C ||||||| ||||||||||||| ||| |||||| |||| |||| || ||| || ||||| | CAAGAUA AAGGAUAAGAUAG UCG CCAAGU UCUC CUCA GA UGA CG UACCA C G UC U UAGA C U ACC CG CU A --UG A CUA |
| Stem-loop sequence | GUUUUGUCUUCCUAUUCUGUCUGAGGUCGGUUUACAGAGCAAGAGUAUCUCGCUAGCUCAAGUGGUAGUAUCGAUCCAACCAUGUGCAAGUUCAGGCACUCCCACUCUUUGAACCCGCUAGAUGAUAGAAUAGGAAUAUAGAACCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017765087.1 |
|
2.5 | PREDICTED: Gossypium arboreum pathogenesis-related protein PR-1 (LOC108464814), mRNA | pathogenesis-related protein PR-1(LOC108464814) | coding protein | psRNATarget |