ncRNA ID | novel_gar_miR1329 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:28563123-28563194 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715;SRR3180720 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGACGUGGACAAAAUGCUCCC - 21 |
Stem-loop(if miRNA) |
--               A        -AAACA       GAGUGUUUUGUCCAC UCAGCAGA      CUUCC   ||||||||||||||| ||||||||      ||||U   CUCGUAAAACAGGUG AGUCGUUU      GGAGU CC               C        CACGCG     |
Stem-loop sequence | GAGUGUUUUGUCCACAUCAGCAGAAAACACUUCCUUGAGGGCGCACUUUGCUGACGUGGACAAAAUGCUCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017784438.1 |
|
2.5 | PREDICTED: Gossypium arboreum serine/threonine-protein phosphatase 7 long form homolog (LOC108481281), mRNA | serine/threonine-protein phosphatase 7 long form homolog(LOC108481281) | coding protein | psRNATarget |