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BaseInfo

ncRNA ID ath-miRf11073-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - AUACUCGACCACCAGGUCGUGUG - NA
Stem-loop(if miRNA)     AC           CCA     U   -    CAG -ACCA  CUCGACCCCCUGGUCGAGUGACUUUGGAGCCAUUCUU
GAAG  AUACUCGACCA   GGUCG GUG CAUC   C     UA                                     C
||||  |||||||||||   ||||| ||| ||||   |     ||                                     C
CUUC  UAUGAGCUGGU   CCAGC CAC GUAG   G     CG                                     C
    AC           CCC     U   C    -UA CUCAC  GACUCGACUCCAAUGAGCUGGUUCCCCAGCUCUUCUA
Stem-loop sequence GAAGACAUACUCGACCACCAGGUCGUGUGCAUCCAGCACCAUACUCGACCCCCUGGUCGAGUGACUUUGGAGCCAUUCUUCCCAUCUUCUCGACCCCUUGGUCGAGUAACCUCAGCUCAGGCCACUCGAUGAUGCCACUCGACCCCCUGGUCGAGUAUCACUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183311.1
ncRNA:23   GUGUGCUGGACCACCAGCUCAUA   1
  =||*|||*||*||||||||||||
targets:579   UACUCGAGCUCGUGGUCGAGUAU   601

2.5 Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence NA coding protein psRNATarget