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BaseInfo

ncRNA ID novel_gar_miR1321
Species Gossypium arboreum
Class miRNA
Genome position Chr4:56913112-56913313 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 24
Mature sequence(if miRNA) 1 - AUUAAUAGGUCUCACUGAAUUCGG - 24
Stem-loop(if miRNA) --U      -   A      C    U  GUA          C  A    UG  -   C        AC         CG             A   A  GUU
   AAUUUA UGA ACCUAU AAUU UA   GUUACUCAAA AU UCAU  UU GUG AAUUACAA  AAUUACACU  AAUUUAAUUACUA GGU GU   U
   |||||| ||| |||||| |||| ||   |||||||||| || ||||  || ||| ||||||||  |||||||||  ||||||||||||| ||| ||   C
   UUAAGU ACU UGGAUA UUAA GU   CAAUGGGUUU UA AGUG  AA CAC UUAAUGUU  UUAAUGUGA  UUAGAUUAAUGAU CCA UA   G
GGC      C   C      A    U  AAC          A  C    GU  A   A        CA         AU             -   C  AAA
Stem-loop sequence UAAUUUAUGAAACCUAUCAAUUUUAGUAGUUACUCAAACAUAUCAUUGUUGUGCAAUUACAAACAAUUACACUCGAAUUUAAUUACUAAGGUAGUGUUUCGAAAAUCACCUAGUAAUUAGAUUUAAGUGUAAUUACUUGUAAUUACACAAAUGGUGACAUAUUUGGGUAACCAAUGUAAUUAAUAGGUCUCACUGAAUUCGG