ncRNA ID | novel_gar_miR1316 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:124684811-124684881 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR3180715 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGACGUGGACAAAAUGCUCCC - 21 |
Stem-loop(if miRNA) |
--                C       --     -  C   GAGCGUUUUGUCUACG CAGCAAA  GCGUG CC C   |||||||||||||||| |||||||  ||||| ||   CUCGUAAAACAGGUGC GUCGUUU  UGCGC GG A CC                A       UU     A  A |
Stem-loop sequence | GAGCGUUUUGUCUACGCCAGCAAAGCGUGCCCCAAGGACGCGUUUUUUGCUGACGUGGACAAAAUGCUCCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017784438.1 |
|
2.5 | PREDICTED: Gossypium arboreum serine/threonine-protein phosphatase 7 long form homolog (LOC108481281), mRNA | serine/threonine-protein phosphatase 7 long form homolog(LOC108481281) | coding protein | psRNATarget |