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BaseInfo

ncRNA ID novel_gar_miR1309
Species Gossypium arboreum
Class miRNA
Genome position Chr3:42648241-42648348 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR3180715
Length 21
Mature sequence(if miRNA) 1 - GGAAGGUUUGGAGGAGAGUGA - 21
Stem-loop(if miRNA) --     -     GA         A   AACAUG  -   AU    AUGA    A
  GGAAG GUUUG  GGAGAGUGA CAA      CC UUG  GAUG    UGAU U
  ||||| |||||  ||||||||| |||      || |||  ||||    ||||
  CCUUC CAAAC  CCUCUCACU GUU      GG AAC  UUAU    GCUA A
AA     G     UC         C   ACUCAA  U   CU    GAGC    U
Stem-loop sequence GGAAGGUUUGGAGGAGAGUGAACAAAACAUGCCUUGAUGAUGAUGAUGAUAUAUAUCGCGAGUAUUUCCAAUGGAACUCAUUGCUCACUCUCCCUCAAACGCUUCCAA