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BaseInfo

ncRNA ID	novel_gar_miR1308
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr3:42648184-42648261 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR3180715;SRR3180719;SRR3180720;SRR3180721
Length	22
Mature sequence(if miRNA)	1 - AGUCUCCCUCAAACGCUUCCAG - 22
Stem-loop(if miRNA)	-- G     CU     G         AUAUUCUACACAC   A UCUCC  CAAAC CUUCCAGCA             U   | |||||  ||||| |||||||||             A   U AGAGG  GUUUG GAAGGUUGU             C AG G     AG     -         CACGACGACCCCC
Stem-loop sequence	AGUCUCCCUCAAACGCUUCCAGCAAUAUUCUACACACUACCCCCCAGCAGCACUGUUGGAAGGUUUGGAGGAGAGUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017762244.1	ncRNA:22   GACCUUCGCAAACUCCCUCUGA   1   =*||||||**|||||||||||| targets:112   UGGGAAGCCAUUGAGGGAGACU   133 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum kinesin-like protein KIN-7K, chloroplastic (LOC108462273), mRNA	kinesin-like protein KIN-7K, chloroplastic(LOC108462273)	coding protein	psRNATarget
XM_017792916.1	ncRNA:22   GACCUUCGCAAACUCCCUCUGA   1   *|**||||||||||*||||||| targets:2803   AUUAAAGCGUUUGAAGGAGACU   2824 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum E3 ubiquitin-protein ligase RKP (LOC108488627), transcript variant X1, mRNA	E3 ubiquitin-protein ligase RKP(LOC108488627)	coding protein	psRNATarget
XM_017792917.1	ncRNA:22   GACCUUCGCAAACUCCCUCUGA   1   *|**||||||||||*||||||| targets:2846   AUUAAAGCGUUUGAAGGAGACU   2867 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum E3 ubiquitin-protein ligase RKP (LOC108488627), transcript variant X2, mRNA	E3 ubiquitin-protein ligase RKP(LOC108488627)	coding protein	psRNATarget